Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMAC_01332 | SMAC_01825 | F7VQI3 | F7VRZ1 | WGS project CABT00000000 data, contig 2.4. | WGS project CABT00000000 data, contig 2.5; Belongs to the AAA ATPase family. | 0.403 |
SMAC_01332 | SMAC_04453 | F7VQI3 | D1ZV85 | WGS project CABT00000000 data, contig 2.4. | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | 0.405 |
SMAC_01825 | SMAC_01332 | F7VRZ1 | F7VQI3 | WGS project CABT00000000 data, contig 2.5; Belongs to the AAA ATPase family. | WGS project CABT00000000 data, contig 2.4. | 0.403 |
SMAC_01825 | SMAC_04453 | F7VRZ1 | D1ZV85 | WGS project CABT00000000 data, contig 2.5; Belongs to the AAA ATPase family. | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | 0.481 |
SMAC_02440 | SMAC_04453 | F7VPK6 | D1ZV85 | WGS project CABT00000000 data, contig 2.3. | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | 0.433 |
SMAC_04263 | SMAC_04453 | F7W1C1 | D1ZV85 | WGS project CABT00000000 data, contig 2.19. | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | 0.465 |
SMAC_04453 | SMAC_01332 | D1ZV85 | F7VQI3 | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | WGS project CABT00000000 data, contig 2.4. | 0.405 |
SMAC_04453 | SMAC_01825 | D1ZV85 | F7VRZ1 | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | WGS project CABT00000000 data, contig 2.5; Belongs to the AAA ATPase family. | 0.481 |
SMAC_04453 | SMAC_02440 | D1ZV85 | F7VPK6 | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | WGS project CABT00000000 data, contig 2.3. | 0.433 |
SMAC_04453 | SMAC_04263 | D1ZV85 | F7W1C1 | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | WGS project CABT00000000 data, contig 2.19. | 0.465 |
SMAC_04453 | SMAC_05619 | D1ZV85 | F7W570 | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | WGS project CABT00000000 data, contig 2.30. | 0.424 |
SMAC_05619 | SMAC_04453 | F7W570 | D1ZV85 | WGS project CABT00000000 data, contig 2.30. | Vacuolar membrane protease; May be involved in vacuolar sorting and osmoregulation. | 0.424 |