STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAPBProbable dipeptidyl-aminopeptidase B; Type IV dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N- termini provided that the penultimate residue is proline. (924 aa)    
Predicted Functional Partners:
SMAC_02938
WGS project CABT00000000 data, contig 2.12.
     
 0.691
SMAC_04565
WGS project CABT00000000 data, contig 2.20.
  
   
0.656
SMAC_12071
WGS project CABT00000000 data, contig 2.5.
    
 
 0.611
SMAC_01075
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.589
SMAC_01076
WGS project CABT00000000 data, contig 2.2.
   
 
 0.589
SMAC_05097
WGS project CABT00000000 data, contig 2.22.
   
 
 0.589
SMAC_08595
WGS project CABT00000000 data, contig 2.60.
   
 
 0.589
KEX1
Pheromone-processing carboxypeptidase KEX1; Protease with a carboxypeptidase B-like function involved in the C-terminal processing of the lysine and arginine residues from protein precursors. Promotes cell fusion and is involved in the programmed cell death (By similarity).
      
 0.565
SMAC_00686
WGS project CABT00000000 data, contig 2.2.
      
 0.549
SMAC_01876
WGS project CABT00000000 data, contig 2.5.
    
 0.536
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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