STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01256Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (445 aa)    
Predicted Functional Partners:
SMAC_04157
WGS project CABT00000000 data, contig 2.15.
  
 
 0.992
SMAC_07976
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 
 0.984
SMAC_01286
WGS project CABT00000000 data, contig 2.4.
  
 
 0.980
SMAC_01281
WGS project CABT00000000 data, contig 2.4.
  
 
 0.810
SMAC_02461
WGS project CABT00000000 data, contig 2.3.
  
 
 0.652
SMAC_03518
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
  
 0.642
SMAC_09143
WGS project CABT00000000 data, contig 2.43.
     
 0.635
SMAC_07518
WGS project CABT00000000 data, contig 2.7.
   
  
 0.629
SMAC_05000
WGS project CABT00000000 data, contig 2.8; Belongs to the BolA/IbaG family.
    
 
 0.626
SMAC_08113
WGS project CABT00000000 data, contig 2.3.
  
  
 0.619
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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