STRINGSTRING
tardbp protein (Ciona intestinalis) - STRING interaction network
"tardbp" - Tardbp protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tardbpTardbp protein (440 aa)    
Predicted Functional Partners:
ENSCING00000008783
Uncharacterized protein (527 aa)
     
 
  0.792
ENSCING00000020692
Uncharacterized protein (465 aa)
     
   
0.690
ENSCING00000021568
Superoxide dismutase [Cu-Zn] ; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (156 aa)
           
  0.576
ENSCING00000021421
Uncharacterized protein (523 aa)
     
      0.569
ENSCING00000015271
Uncharacterized protein (102 aa)
     
      0.569
ENSCING00000004712
Uncharacterized protein (390 aa)
     
 
0.505
ENSCING00000004101
Uncharacterized protein (561 aa)
     
 
  0.500
ENSCING00000003864
Uncharacterized protein (627 aa)
     
 
  0.500
zf(rbz)
Zinc finger protein (237 aa)
     
   
  0.498
ENSCING00000007091
Uncharacterized protein (811 aa)
       
 
  0.497
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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