STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6V5Q8_CIOINUncharacterized protein; Belongs to the peptidase S9B family. (787 aa)    
Predicted Functional Partners:
F6WSV9_CIOIN
A_deaminase domain-containing protein.
   
 
 0.525
F7AR10_CIOIN
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.464
F7AQZ5_CIOIN
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.464
H2XQV7_CIOIN
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.464
L7N0S6_CIOIN
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.402
LOC100183780
Signal peptidase complex catalytic subunit SEC11.
   
 
 0.402
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.