STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6SE21_CIOINUncharacterized protein. (611 aa)    
Predicted Functional Partners:
LOC100176009
cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.
  
0.952
LOC100184788
Non-specific serine/threonine protein kinase.
  
 
0.911
Cibeta-catenin
Uncharacterized protein.
     
 0.903
LOC100176540
Uncharacterized protein LOC100176540.
     
  0.900
gsk
Glycogen synthase kinase Alpha/beta.
   
 
0.900
F6RA92_CIOIN
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
     
  0.900
F7A9X0_CIOIN
Protein kinase domain-containing protein.
   
 
 
0.900
LOC100186367
Gamma-aminobutyric acid receptor-associated protein.
   
 
  0.900
F6RF40_CIOIN
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
  0.900
H2XXD3_CIOIN
Uncharacterized protein; Belongs to the protein kinase superfamily.
  
0.543
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.