STRINGSTRING
ENSCING00000000553 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000553" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000553Uncharacterized protein (369 aa)    
Predicted Functional Partners:
ENSCING00000009957
Uncharacterized protein (87 aa)
       
 
  0.944
ENSCING00000019591
Uncharacterized protein (460 aa)
       
  0.823
ENSCING00000004738
Uncharacterized protein (713 aa)
       
  0.823
ENSCING00000016659
Uncharacterized protein (672 aa)
       
  0.823
ENSCING00000002533
Zinc finger protein (866 aa)
       
  0.823
ENSCING00000000033
Zinc finger protein (879 aa)
       
  0.823
ENSCING00000004216
Uncharacterized protein (986 aa)
       
  0.745
LOC494375
Toll-like receptor 7-like precursor (933 aa)
       
  0.683
ENSCING00000005640
IkappaB kinase (797 aa)
       
  0.659
ENSCING00000020086
Uncharacterized protein (310 aa)
       
    0.619
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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