STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6Q792_CIOINtRNA_int_endo domain-containing protein. (140 aa)    
Predicted Functional Partners:
H2XWY8_CIOIN
tRNA_int_end_N2 domain-containing protein.
    
 0.975
F6Q909_CIOIN
Uncharacterized protein.
    
   0.918
LOC100183747
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.745
LOC100177882
Ribonuclease P protein subunit p30-like.
   
 
  0.593
H2XRD0_CIOIN
POP4 domain-containing protein.
   
 
 0.585
LOC100182886
Ribonuclease P protein subunit p21.
     
 0.575
F6ZE98_CIOIN
Uncharacterized protein.
     
 0.550
LOC100175786
Ribonucleases P/MRP protein subunit POP1 isoform X1.
     
 0.548
LOC100187385
Mitochondrial ribonuclease P catalytic subunit.
   
 
  0.546
F6W2K7_CIOIN
Uncharacterized protein.
     
  0.540
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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