STRINGSTRING
ENSCING00000000616 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000616" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000616Uncharacterized protein (343 aa)    
Predicted Functional Partners:
ENSCING00000014661
Uncharacterized protein ; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (284 aa)
     
  0.993
ENSCING00000006151
Uncharacterized protein (257 aa)
     
  0.990
ENSCING00000001776
Uncharacterized protein (515 aa)
     
  0.988
ENSCING00000009619
Uncharacterized protein (314 aa)
     
  0.988
Cin.26664
Uncharacterized protein (316 aa)
     
  0.983
ENSCING00000007884
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1814 aa)
       
  0.979
ENSCING00000004652
Uncharacterized protein (551 aa)
     
  0.977
ercc3
Excision repair cross-complementing rodent repair deficiency, complementation group 3 (794 aa)
     
  0.976
ENSCING00000019359
Uncharacterized protein (141 aa)
       
  0.976
ENSCING00000024933
Uncharacterized protein (211 aa)
     
  0.975
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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