Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100186343CKLF-like MARVEL transmembrane domain-containing protein 8. (160 aa)    
Predicted Functional Partners:
LOC100178597
Myeloid-associated differentiation marker-like protein 2 isoform X1.
      
 0.756
LOC100185963
CKLF-like MARVEL transmembrane domain-containing protein 4.
      
 0.650
F6XFP6_CIOIN
MARVEL domain-containing protein.
      
 0.577
LOC100186865
CKLF-like MARVEL transmembrane domain-containing protein 7.
      
 0.577
H2XVU8_CIOIN
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
      
 0.435
LOC100175378
Peptidylprolyl isomerase.
      
 0.428
LOC100176507
Synaptobrevin homolog YKT6-like isoform X2; Belongs to the synaptobrevin family.
      
 0.424
LOC100177796
Protein kinase domain-containing protein.
      
 0.419
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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