STRINGSTRING
hspb1 protein (Ciona intestinalis) - STRING interaction network
"hspb1" - Heat shock protein HSP27-like protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspb1Heat shock protein HSP27-like protein (190 aa)    
Predicted Functional Partners:
ENSCING00000008202
Uncharacterized protein (361 aa)
       
  0.773
ENSCING00000005709
Uncharacterized protein (473 aa)
       
  0.764
ENSCING00000009665
Uncharacterized protein (664 aa)
     
  0.743
ENSCING00000005773
Uncharacterized protein (234 aa)
       
 
  0.700
erk3/4
Mitogen-activated protein kinase (906 aa)
       
  0.648
erk1/2
Mitogen-activated protein kinase (350 aa)
       
  0.639
ENSCING00000009590
Uncharacterized protein (659 aa)
     
  0.627
ENSCING00000016737
Uncharacterized protein (308 aa)
       
  0.626
ENSCING00000003877
Uncharacterized protein (365 aa)
       
  0.626
ENSCING00000007929
Uncharacterized protein (421 aa)
       
  0.616
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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