STRINGSTRING
trrap protein (Ciona intestinalis) - STRING interaction network
"trrap" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trrapUncharacterized protein (2944 aa)    
Predicted Functional Partners:
ENSCING00000013825
Uncharacterized protein (181 aa)
       
  0.976
ENSCING00000010516
Uncharacterized protein (228 aa)
       
  0.968
ENSCING00000012884
Uncharacterized protein (402 aa)
     
  0.960
ENSCING00000012953
Uncharacterized protein (293 aa)
     
  0.959
Cin.11699
Uncharacterized protein (172 aa)
     
  0.957
ENSCING00000008712
Uncharacterized protein (423 aa)
       
  0.955
ENSCING00000001931
Uncharacterized protein (409 aa)
       
  0.954
actl6b
Uncharacterized protein (423 aa)
       
  0.953
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.953
kat2b
Uncharacterized protein (365 aa)
     
  0.953
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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