Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6QRZ2_CIOINUncharacterized protein. (319 aa)    
Predicted Functional Partners:
LOC101242287
Serine/threonine-protein kinase 3.
   
 0.805
F6YC82_CIOIN
SARAH domain-containing protein.
    
 
 0.666
F6W7N8_CIOIN
Uncharacterized protein.
      
 0.661
H2XRN4_CIOIN
TOG domain-containing protein.
      
 0.584
F7BHV9_CIOIN
Uncharacterized protein.
   
  
 0.540
LOC100187074
Uncharacterized protein.
      
 0.529
F7API1_CIOIN
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.524
F6T1T3_CIOIN
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.524
LOC100179329
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
      
 0.499
F7B8Y3_CIOIN
Uncharacterized protein.
    
 
 0.458
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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