F6Q4Z2_CIOIN protein (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

F6Q4Z2_CIOIN

Uncharacterized protein. (276 aa)

Predicted Functional Partners:

LOC100181928

0.994

F6SBF1_CIOIN

0.993

zf(c3h)-12

0.991

F6RKQ2_CIOIN

0.989

F6QBK7_CIOIN

0.986

F6W453_CIOIN

0.981

F6V9P3_CIOIN

0.977

LOC100182504

0.976

F7A5V7_CIOIN

0.973

F7BP62_CIOIN

0.961

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6Q4Z2_CIOIN	F6QBK7_CIOIN	ENSCINP00000001336	ENSCINP00000006136	Uncharacterized protein.	Uncharacterized protein.	0.986
F6Q4Z2_CIOIN	F6RKQ2_CIOIN	ENSCINP00000001336	ENSCINP00000013154	Uncharacterized protein.	Uncharacterized protein.	0.989
F6Q4Z2_CIOIN	F6SBF1_CIOIN	ENSCINP00000001336	ENSCINP00000014368	Uncharacterized protein.	Uncharacterized protein.	0.993
F6Q4Z2_CIOIN	F6V9P3_CIOIN	ENSCINP00000001336	ENSCINP00000010807	Uncharacterized protein.	Uncharacterized protein.	0.977
F6Q4Z2_CIOIN	F6W453_CIOIN	ENSCINP00000001336	ENSCINP00000016360	Uncharacterized protein.	Uncharacterized protein.	0.981
F6Q4Z2_CIOIN	F7A5V7_CIOIN	ENSCINP00000001336	ENSCINP00000018919	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.973
F6Q4Z2_CIOIN	F7BP62_CIOIN	ENSCINP00000001336	ENSCINP00000008636	Uncharacterized protein.	Uncharacterized protein.	0.961
F6Q4Z2_CIOIN	LOC100181928	ENSCINP00000001336	ENSCINP00000005514	Uncharacterized protein.	Uncharacterized protein.	0.994
F6Q4Z2_CIOIN	LOC100182504	ENSCINP00000001336	ENSCINP00000024571	Uncharacterized protein.	Uncharacterized protein.	0.976
F6Q4Z2_CIOIN	zf(c3h)-12	ENSCINP00000001336	ENSCINP00000012055	Uncharacterized protein.	Uncharacterized protein.	0.991
F6QBK7_CIOIN	F6Q4Z2_CIOIN	ENSCINP00000006136	ENSCINP00000001336	Uncharacterized protein.	Uncharacterized protein.	0.986
F6QBK7_CIOIN	F6RKQ2_CIOIN	ENSCINP00000006136	ENSCINP00000013154	Uncharacterized protein.	Uncharacterized protein.	0.993
F6QBK7_CIOIN	F6SBF1_CIOIN	ENSCINP00000006136	ENSCINP00000014368	Uncharacterized protein.	Uncharacterized protein.	0.997
F6QBK7_CIOIN	F6V9P3_CIOIN	ENSCINP00000006136	ENSCINP00000010807	Uncharacterized protein.	Uncharacterized protein.	0.998
F6QBK7_CIOIN	F6W453_CIOIN	ENSCINP00000006136	ENSCINP00000016360	Uncharacterized protein.	Uncharacterized protein.	0.997
F6QBK7_CIOIN	F7A5V7_CIOIN	ENSCINP00000006136	ENSCINP00000018919	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995
F6QBK7_CIOIN	F7BP62_CIOIN	ENSCINP00000006136	ENSCINP00000008636	Uncharacterized protein.	Uncharacterized protein.	0.997
F6QBK7_CIOIN	LOC100181928	ENSCINP00000006136	ENSCINP00000005514	Uncharacterized protein.	Uncharacterized protein.	0.998
F6QBK7_CIOIN	LOC100182504	ENSCINP00000006136	ENSCINP00000024571	Uncharacterized protein.	Uncharacterized protein.	0.996
F6QBK7_CIOIN	zf(c3h)-12	ENSCINP00000006136	ENSCINP00000012055	Uncharacterized protein.	Uncharacterized protein.	0.996