Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100180444BAH domain-containing protein. (230 aa)    
Predicted Functional Partners:
F6WDK3_CIOIN
Uncharacterized protein.
    
 
 0.916
F6VI88_CIOIN
Uncharacterized protein.
      
 0.743
zf(ubr)-2
Zinc finger protein.
    
 
 0.695
LOC100186125
Glutaredoxin-3.
      
 0.662
LOC100180439
Transmembrane protein 43.
      
 0.657
F7AVM0_CIOIN
Uncharacterized protein.
      
 0.655
LOC100179293
PPP1R35_C domain-containing protein.
      
 0.584
F6V386_CIOIN
Carbohydrate sulfotransferase.
      
 0.529
F6PLA8_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.524
LOC100184253
N-alpha-acetyltransferase 30.
      
 0.517
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.