Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6PH94_CIOINUncharacterized protein. (268 aa)    
Predicted Functional Partners:
F6TI55_CIOIN
Uncharacterized protein.
     
 0.915
F7ARL3_CIOIN
SAM domain-containing protein.
     
 0.912
F6ZYB8_CIOIN
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family.
     
 0.911
LOC100186563
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family.
     
 0.911
F6Q9D5_CIOIN
Metallophos domain-containing protein.
     
 0.911
LOC100177985
Phospholipid phosphatase 1 isoform X1.
    
 0.907
F6WVN4_CIOIN
acidPPc domain-containing protein.
    
 0.904
F7A1T4_CIOIN
Uncharacterized protein.
     
 0.903
LOC100178733
Sphingolipid delta(4)-desaturase DES1-like; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
     
 0.903
F6VAL7_CIOIN
Uncharacterized protein.
  
  
 
0.903
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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