STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)    
Predicted Functional Partners:
LOC100179894
Werner syndrome ATP-dependent helicase homolog isoform X1.
   
 0.972
H2XKT2_CIOIN
3'-5' exonuclease domain-containing protein.
   
 0.972
F6TV58_CIOIN
Uncharacterized protein.
 
 
 0.969
H2Y2T2_CIOIN
FAT domain-containing protein.
 
     0.949
H2XV25_CIOIN
Uncharacterized protein.
 
 
 0.931
H2Y0W5_CIOIN
FATC domain-containing protein.
 
 
 0.931
F6QHZ5_CIOIN
FHA domain-containing protein.
    
 0.928
LOC100185652
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.928
H2XM17_CIOIN
FAT domain-containing protein.
 
 
 0.928
H2XPH2_CIOIN
DUF3385 domain-containing protein.
 
 
 0.928
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.