Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6R1I0_CIOINUncharacterized protein. (362 aa)    
Predicted Functional Partners:
LOC100182745
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
   
 0.992
LOC100185742
Guanine nucleotide-binding protein subunit beta-5.
   
 0.984
H2XQR3_CIOIN
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.971
H2XP47_CIOIN
G protein gamma domain-containing protein.
    
 0.957
H2XXW5_CIOIN
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.957
F6PR32_CIOIN
Uncharacterized protein.
  
 
0.929
H2Y1Q1_CIOIN
Uncharacterized protein.
  
 
0.928
F6RD62_CIOIN
Uncharacterized protein.
  
 
0.923
LOC104266020
Uncharacterized protein.
  
0.918
LOC100185405
Guanine nucleotide-binding protein G(S) subunit alpha-like.
  
0.914
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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