Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100187102BLOC-1-related complex subunit 6-like. (214 aa)    
Predicted Functional Partners:
LOC113474176
kxDL motif-containing protein 1-like.
    
 0.998
LOC101242531
BLOC-1-related complex subunit 8-like.
   
 0.998
LOC100176356
SNARE-associated protein Snapin-like.
   
 
 0.968
LOC100183183
Biogenesis of lysosome-related organelles complex 1 subunit 1-like.
    
 
 0.953
H2XRG9_CIOIN
Uncharacterized protein.
     
  0.900
H2XMY8_CIOIN
Uncharacterized protein.
      
 0.661
LOC100179671
Gem-associated protein 7-like.
      
 0.637
LOC100181499
Uncharacterized protein LOC100181499.
    
 
 0.618
F7B4T0_CIOIN
NUDE_C domain-containing protein.
    
 
 0.576
LOC100177011
Ragulator complex protein LAMTOR2-B.
    
 
 0.569
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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