STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6R0P0_CIOINRibosomal_S10 domain-containing protein. (128 aa)    
Predicted Functional Partners:
LOC100181712
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
LOC100177158
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
F6YMZ5_CIOIN
Uncharacterized protein.
   
 0.999
LOC100186730
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
LOC100183019
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
F6TJY9_CIOIN
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.999
LOC100179473
Guanine nucleotide-binding protein subunit beta-2-like 1.
   
 
 0.999
LOC100176033
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
LOC100178199
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
LOC100183027
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.