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rbj protein (Ciona intestinalis) - STRING interaction network
"rbj" - Ras-associated protein Rap1 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbjRas-associated protein Rap1 (267 aa)    
Predicted Functional Partners:
ENSCING00000005522
Uncharacterized protein (720 aa)
     
  0.795
zf(dhhc)-4
Zinc finger protein (590 aa)
     
  0.789
ENSCING00000023687
Uncharacterized protein (820 aa)
     
  0.778
ENSCING00000004160
Uncharacterized protein (157 aa)
   
  0.772
ENSCING00000022926
Uncharacterized protein (267 aa)
   
0.759
ENSCING00000002960
Uncharacterized protein (209 aa)
   
0.734
ENSCING00000012837
Uncharacterized protein (699 aa)
     
  0.729
ENSCING00000013183
Uncharacterized protein (77 aa)
     
  0.705
ENSCING00000024495
Uncharacterized protein (186 aa)
     
      0.686
ENSCING00000008827
Uncharacterized protein (847 aa)
     
  0.662
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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