STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7AS59_CIOINSprT-like domain-containing protein. (197 aa)    
Predicted Functional Partners:
F7AVN1_CIOIN
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
      0.705
LOC100177214
Uncharacterized protein.
    
 0.556
F6Z277_CIOIN
Uncharacterized protein.
    
 0.556
H2XPK8_CIOIN
SprT-like domain-containing protein.
   
  
 0.552
LOC100182246
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.519
LOC100176776
Uncharacterized protein LOC100176776.
    
 0.483
LOC100180234
Histidine triad nucleotide-binding protein 2, mitochondrial-like.
    
 0.483
F6SGR7_CIOIN
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.478
LOC100183393
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.446
LOC100179492
FAD synthase.
      
 0.436
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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