Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100176958Golgi-associated plant pathogenesis-related protein 1 isoform X1; Belongs to the CRISP family. (192 aa)    
Predicted Functional Partners:
F7A2X8_CIOIN
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.726
F7B4V3_CIOIN
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
      
 0.694
H2XTM4_CIOIN
LIM zinc-binding domain-containing protein.
      
 0.621
F7A2L3_CIOIN
SCP domain-containing protein; Belongs to the CRISP family.
  
  
 0.558
F6QH26_CIOIN
SCP domain-containing protein; Belongs to the CRISP family.
  
   
 0.528
LOC100186797
GLIPR1-like protein 1; Belongs to the CRISP family.
  
    0.490
F6QD80_CIOIN
SCP domain-containing protein; Belongs to the CRISP family.
  
     0.485
LOC100186050
Uncharacterized protein.
      
 0.485
LOC101242476
Glioma pathogenesis-related protein 1-like; Belongs to the CRISP family.
  
     0.457
LOC100185684
CiUrabin; Belongs to the CRISP family.
  
    0.453
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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