Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100186038Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like. (349 aa)    
Predicted Functional Partners:
F7A0D6_CIOIN
Epoxide hydrolase.
   
 
 0.940
F6ZRC6_CIOIN
Aldo_ket_red domain-containing protein.
  
 
 0.917
LOC100176226
Aldose reductase-like.
  
 
 0.917
H2XUY3_CIOIN
Aldo_ket_red domain-containing protein.
  
 
 0.917
F6WBF5_CIOIN
Xylose isomerase.
    
 0.913
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
 
 0.755
LOC100178248
3-ketodihydrosphingosine reductase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.714
LOC100184729
Regucalcin-like.
  
 
 0.630
LOC100177329
Galactokinase-like.
  
 
 0.622
F6ZS66_CIOIN
Uncharacterized protein.
  
 
 0.622
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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