Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F6XBM6_CIOINUncharacterized protein. (1509 aa)    
Predicted Functional Partners:
LOC100182370
Cytochrome b-245 light chain isoform X1.
   
 0.961
nox4
FAD-binding FR-type domain-containing protein.
     
0.912
Nox2
FAD-binding FR-type domain-containing protein.
     
0.906
Duox-c
Uncharacterized protein.
  
  
 
0.903
F6SUH2_CIOIN
Uncharacterized protein.
  
 0.746
LOC100185260
Dual oxidase maturation factor 1-like isoform X1.
  
 0.743
F6REW6_CIOIN
Uncharacterized protein.
  
 0.643
P67phox
TPR_REGION domain-containing protein.
   
 0.554
Duox-b
Ferric oxidoreductase domain-containing protein.
  
     0.524
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.429
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (22%) [HD]