STRINGSTRING
duox-d protein (Ciona intestinalis) - STRING interaction network
"duox-d" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
duox-dUncharacterized protein (1509 aa)    
Predicted Functional Partners:
ENSCING00000022975
Uncharacterized protein (175 aa)
     
  0.728
p67phox
Neutrophil cytosolic factor 2 (515 aa)
     
  0.691
ENSCING00000022173
Uncharacterized protein (623 aa)
     
 
  0.638
ENSCING00000018245
Uncharacterized protein (152 aa)
     
 
  0.638
hephl1
Uncharacterized protein (1060 aa)
     
 
  0.638
ENSCING00000016175
Uncharacterized protein (481 aa)
     
   
  0.575
ENSCING00000013783
Uncharacterized protein (216 aa)
     
   
  0.575
rcl1
Rac and Cdc42-like 1 protein (194 aa)
     
  0.542
LOC445702
Rac1 protein (192 aa)
     
  0.542
ENSCING00000001333
Uncharacterized protein (549 aa)
     
   
  0.535
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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