Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F6VE39_CIOINPeroxisomal membrane protein PEX16. (103 aa)    
Predicted Functional Partners:
H2XZH5_CIOIN
Uncharacterized protein.
   
 0.936
H2XYD5_CIOIN
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.805
LOC100180448
Peroxisomal membrane protein PEX14-like isoform X1.
    
 0.777
LOC100181214
ATP-binding cassette sub-family D member 3-like.
     
 0.732
F6RC16_CIOIN
ATPase_AAA_core domain-containing protein.
     
 0.668
LOC100180565
Peroxisomal membrane protein 11A-like.
   
 
 0.661
LOC100185991
Pex2_Pex12 domain-containing protein.
      
 0.659
H2XZN8_CIOIN
WD_REPEATS_REGION domain-containing protein.
      
 0.647
F6Q1G7_CIOIN
AAA domain-containing protein; Belongs to the AAA ATPase family.
     
 0.603
LOC100185013
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
     
 0.600
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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