STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XWC8_CIOINUncharacterized protein. (3955 aa)    
Predicted Functional Partners:
F6S4F7_CIOIN
Non-specific serine/threonine protein kinase.
      
 0.651
F7B2P5_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
LOC100185638
Leucine-rich repeat-containing protein 70.
   
 0.646
F7AT69_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
zf(c2h2)-100
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
F6YS37_CIOIN
Uncharacterized protein.
   
 0.646
H2XLP9_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
H2XND0_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
H2XZ79_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
H2Y2E5_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.646
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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