STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6WIH5_CIOINSulfiredoxin. (119 aa)    
Predicted Functional Partners:
per-like
Peroxiredoxin-like.
   
 0.912
F6QQZ3_CIOIN
Thioredoxin domain-containing protein.
   
 0.809
LOC100175802
Peroxiredoxin-like.
   
 0.809
LOC100177610
Peroxiredoxin-6-like isoform X1.
   
 0.755
H2XQS5_CIOIN
Thioredoxin domain-containing protein.
   
 0.755
F7AVB6_CIOIN
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
  
 0.543
F7B7H5_CIOIN
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.503
LOC100176873
Seipin.
      
 0.476
LOC100183957
Thioredoxin; Belongs to the thioredoxin family.
   
 
 0.437
LOC100181030
Thioredoxin; Belongs to the thioredoxin family.
   
 
 0.437
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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