STRINGSTRING
ENSCING00000001888 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001888" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001888Uncharacterized protein (429 aa)    
Predicted Functional Partners:
ENSCING00000006069
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (786 aa)
     
 
  0.986
ENSCING00000005419
Uncharacterized protein (754 aa)
     
      0.981
ENSCING00000005185
Uncharacterized protein (516 aa)
     
      0.981
ENSCING00000010738
Uncharacterized protein (538 aa)
     
   
  0.976
ENSCING00000016546
Uncharacterized protein (71 aa)
     
   
  0.976
ENSCING00000011810
Uncharacterized protein (225 aa)
     
   
  0.972
ENSCING00000024594
Uncharacterized protein (238 aa)
     
   
  0.972
ENSCING00000005068
Uncharacterized protein (580 aa)
     
   
  0.972
ENSCING00000012967
Uncharacterized protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
   
0.966
ENSCING00000003329
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1141 aa)
     
   
  0.963
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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