clip-like protein (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

clip-like

TILa domain-containing protein. (764 aa)

Predicted Functional Partners:

dan

0.540

F6T9V7_CIOIN

0.525

H2Y0J4_CIOIN

0.521

LOC100186815

0.508

H2XZ15_CIOIN

0.507

LOC100181290

0.504

LOC100175261

0.502

F6S9P0_CIOIN

0.502

F6ZSD7_CIOIN

0.501

H2Y3H1_CIOIN

0.501

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6S9P0_CIOIN	F6T9V7_CIOIN	ENSCINP00000026624	ENSCINP00000022336	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	B30.2/SPRY domain-containing protein.	0.519
F6S9P0_CIOIN	F6ZSD7_CIOIN	ENSCINP00000026624	ENSCINP00000004251	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Uncharacterized protein.	0.490
F6S9P0_CIOIN	H2Y0J4_CIOIN	ENSCINP00000026624	ENSCINP00000035428	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Uncharacterized protein.	0.536
F6S9P0_CIOIN	LOC100175261	ENSCINP00000026624	ENSCINP00000012006	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	CNX domain-containing protein.	0.442
F6S9P0_CIOIN	LOC100186815	ENSCINP00000026624	ENSCINP00000018431	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Insulin-like growth factor-binding protein 5.	0.501
F6S9P0_CIOIN	clip-like	ENSCINP00000026624	ENSCINP00000004138	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	TILa domain-containing protein.	0.502
F6T9V7_CIOIN	F6S9P0_CIOIN	ENSCINP00000022336	ENSCINP00000026624	B30.2/SPRY domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.519
F6T9V7_CIOIN	F6ZSD7_CIOIN	ENSCINP00000022336	ENSCINP00000004251	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.516
F6T9V7_CIOIN	H2Y0J4_CIOIN	ENSCINP00000022336	ENSCINP00000035428	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.558
F6T9V7_CIOIN	H2Y3H1_CIOIN	ENSCINP00000022336	ENSCINP00000036456	B30.2/SPRY domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.515
F6T9V7_CIOIN	LOC100175261	ENSCINP00000022336	ENSCINP00000012006	B30.2/SPRY domain-containing protein.	CNX domain-containing protein.	0.513
F6T9V7_CIOIN	LOC100181290	ENSCINP00000022336	ENSCINP00000024973	B30.2/SPRY domain-containing protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.514
F6T9V7_CIOIN	LOC100186815	ENSCINP00000022336	ENSCINP00000018431	B30.2/SPRY domain-containing protein.	Insulin-like growth factor-binding protein 5.	0.520
F6T9V7_CIOIN	clip-like	ENSCINP00000022336	ENSCINP00000004138	B30.2/SPRY domain-containing protein.	TILa domain-containing protein.	0.525
F6ZSD7_CIOIN	F6S9P0_CIOIN	ENSCINP00000004251	ENSCINP00000026624	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.490
F6ZSD7_CIOIN	F6T9V7_CIOIN	ENSCINP00000004251	ENSCINP00000022336	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.516
F6ZSD7_CIOIN	H2XZ15_CIOIN	ENSCINP00000004251	ENSCINP00000034899	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.447
F6ZSD7_CIOIN	H2Y0J4_CIOIN	ENSCINP00000004251	ENSCINP00000035428	Uncharacterized protein.	Uncharacterized protein.	0.510
F6ZSD7_CIOIN	H2Y3H1_CIOIN	ENSCINP00000004251	ENSCINP00000036456	Uncharacterized protein.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.474
F6ZSD7_CIOIN	LOC100175261	ENSCINP00000004251	ENSCINP00000012006	Uncharacterized protein.	CNX domain-containing protein.	0.480