STRINGSTRING
lasp protein (Ciona intestinalis) - STRING interaction network
"lasp" - LIM and SH3 protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
laspLIM and SH3 protein (236 aa)    
Predicted Functional Partners:
if-a
Intermediate filament protein IF-A (523 aa)
     
  0.582
ENSCING00000023541
Uncharacterized protein (672 aa)
           
  0.573
actn2
Uncharacterized protein (927 aa)
     
  0.451
ENSCING00000022864
Uncharacterized protein (182 aa)
     
  0.446
ENSCING00000019170
Uncharacterized protein (218 aa)
     
  0.446
ENSCING00000019144
Uncharacterized protein (256 aa)
     
  0.446
ENSCING00000023663
Uncharacterized protein (207 aa)
     
  0.446
ENSCING00000020679
Uncharacterized protein (336 aa)
     
  0.446
ENSCING00000023142
Uncharacterized protein (152 aa)
     
  0.446
ENSCING00000024831
Uncharacterized protein (135 aa)
     
  0.446
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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