STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6SS61_CIOINPhosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (245 aa)    
Predicted Functional Partners:
LOC100183658
NTP_transferase domain-containing protein.
  
 
 0.993
LOC100179626
Mannose-6-phosphate isomerase-like.
  
 
 0.990
F6TC27_CIOIN
NTP_transferase domain-containing protein.
  
 
 0.966
F6Q0G0_CIOIN
NTP_transferase domain-containing protein.
  
 
 0.966
F6YLI3_CIOIN
Phosphotransferase.
     
 0.942
H2XKD1_CIOIN
Phosphotransferase.
     
 0.942
H2XUD0_CIOIN
Phosphotransferase.
     
 0.942
F7AZD3_CIOIN
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.912
H2Y0Q7_CIOIN
Na_Ca_ex domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      0.813
H2XT70_CIOIN
Thymidine kinase.
   
 
 0.778
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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