STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6SRZ2_CIOINUncharacterized protein. (233 aa)    
Predicted Functional Partners:
LOC100175172
Activating signal cointegrator 1 complex subunit 1-like.
    
 0.782
H2XPC0_CIOIN
Helicase ATP-binding domain-containing protein.
    
 0.673
H2XVJ9_CIOIN
Helicase C-terminal domain-containing protein.
    
 0.673
H2Y226_CIOIN
Uncharacterized protein.
    
 0.673
F7BQ10_CIOIN
ASCH domain-containing protein.
    
 
 0.619
F7BPY2_CIOIN
zf-C2HC5 domain-containing protein.
    
 
 0.619
LOC100176960
Uncharacterized protein.
    
 0.578
H2Y1B1_CIOIN
AKAP7_NLS domain-containing protein.
    
 0.562
F6WFN8_CIOIN
RING-type domain-containing protein.
    
 
 0.418
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.