STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6PJ75_CIOINSec2p domain-containing protein. (274 aa)    
Predicted Functional Partners:
LOC494428
Uncharacterized protein.
    
 0.930
H2XRU0_CIOIN
Sec8_exocyst domain-containing protein.
    
 0.920
F6Q8U3_CIOIN
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.915
F6R924_CIOIN
Uncharacterized protein.
    
 0.890
F6R906_CIOIN
Uncharacterized protein.
    
 0.890
F6ZZ65_CIOIN
Uncharacterized protein.
    
 0.840
LOC100179970
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
      
 0.838
F6Y5P5_CIOIN
WD_REPEATS_REGION domain-containing protein.
      
 0.829
LOC100184914
Uncharacterized protein.
    
 0.822
LOC100178018
Uncharacterized protein.
    
 0.822
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (40%) [HD]