STRINGSTRING
Cin.24983 protein (Ciona intestinalis) - STRING interaction network
"Cin.24983" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.24983Uncharacterized protein (561 aa)    
Predicted Functional Partners:
ENSCING00000021898
Uncharacterized protein (133 aa)
     
  0.832
ENSCING00000023482
Uncharacterized protein (607 aa)
     
    0.574
ddb1
Uncharacterized protein (1145 aa)
     
  0.503
ENSCING00000022981
Uncharacterized protein (917 aa)
     
  0.459
ENSCING00000019272
Uncharacterized protein (362 aa)
     
  0.455
ENSCING00000013290
Uncharacterized protein (221 aa)
     
  0.455
ENSCING00000020693
Uncharacterized protein (257 aa)
     
  0.454
ENSCING00000005608
Uncharacterized protein (356 aa)
     
    0.439
ENSCING00000004870
Uncharacterized protein (336 aa)
     
    0.429
ENSCING00000001161
Uncharacterized protein ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (121 aa)
       
      0.429
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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