STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100177512Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1125 aa)    
Predicted Functional Partners:
F6UJ17_CIOIN
Uncharacterized protein.
   
 
 0.708
H2XJS9_CIOIN
Protein kinase domain-containing protein.
   
 
 0.708
H2Y2H0_CIOIN
Protein kinase domain-containing protein.
   
 
 0.708
LOC100179460
Proteasome subunit beta.
 
 
    0.688
F6T7H6_CIOIN
CTP_transf_like domain-containing protein.
     
 0.593
F6YFY0_CIOIN
Tr-type G domain-containing protein.
      
 0.537
F6VMS4_CIOIN
Uncharacterized protein.
   
 0.533
F6U899_CIOIN
DJ-1_PfpI domain-containing protein.
     
 0.530
H2XQI8_CIOIN
DUF1866 domain-containing protein.
      
 0.528
F6ST26_CIOIN
Uncharacterized protein.
    
 0.518
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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