STRINGSTRING
atp13a3 protein (Ciona intestinalis) - STRING interaction network
"atp13a3" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp13a3Uncharacterized protein (1125 aa)    
Predicted Functional Partners:
ephrina-b
Ephrin precursor (265 aa)
     
        0.670
ephrinb
Ephrin precursor (359 aa)
     
        0.670
ephrin-a
Ephrin precursor (248 aa)
     
        0.670
ephrina-c
Ephrin precursor (264 aa)
     
        0.670
ephrina-d
Ephrin precursor (278 aa)
     
        0.670
ENSCING00000022736
Uncharacterized protein (73 aa)
     
 
  0.418
ENSCING00000011508
Uncharacterized protein (167 aa)
     
 
  0.418
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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