STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100181294Uncharacterized protein. (830 aa)    
Predicted Functional Partners:
F7B314_CIOIN
Uncharacterized protein.
    
 0.978
LOC100182630
Intraflagellar transport protein 81 homolog.
   
 0.978
F6X0V6_CIOIN
Uncharacterized protein.
   
 0.977
F7ANB6_CIOIN
Uncharacterized protein.
    
 0.976
LOC100184954
Uncharacterized protein.
   
 0.975
LOC100184081
Uncharacterized protein.
    
 0.974
LOC100184905
TRAF3-interacting protein 1.
   
 0.939
H2XW62_CIOIN
Uncharacterized protein.
    
 0.935
F6ZAP9_CIOIN
Uncharacterized protein.
   
 0.928
LOC100176974
Uncharacterized protein.
   
 0.923
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.