STRINGSTRING
Cin.27512 protein (Ciona intestinalis) - STRING interaction network
"Cin.27512" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.27512Uncharacterized protein (78 aa)    
Predicted Functional Partners:
ENSCING00000006501
Uncharacterized protein (778 aa)
     
  0.988
ENSCING00000008647
Uncharacterized protein (530 aa)
     
  0.977
ENSCING00000007561
Uncharacterized protein (183 aa)
     
  0.972
ENSCING00000015300
Uncharacterized protein (208 aa)
       
  0.971
ENSCING00000006095
Uncharacterized protein (446 aa)
     
  0.970
ENSCING00000023849
Uncharacterized protein (145 aa)
     
  0.970
ENSCING00000007224
Uncharacterized protein (294 aa)
     
  0.970
ENSCING00000002955
Uncharacterized protein (707 aa)
     
  0.965
cul4a
Uncharacterized protein (614 aa)
     
  0.965
ENSCING00000001932
Uncharacterized protein (186 aa)
     
  0.946
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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