STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6ZP71_CIOINUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (476 aa)    
Predicted Functional Partners:
NADH1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
    
 0.995
NADH3
NADH-ubiquinone oxidoreductase chain 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.995
LOC100185261
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.
    
 
 0.988
NADH4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.984
H2XN49_CIOIN
Uncharacterized protein.
    
 
 0.978
H2XRW4_CIOIN
Uncharacterized protein.
    
 
 0.977
LOC100176100
Uncharacterized protein.
   
   0.976
LOC100187136
Uncharacterized protein.
    
 0.968
LOC100183052
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 
 0.965
LOC100176138
NADH-ubiquinone oxidoreductase 49 kDa subunit-like; Belongs to the complex I 49 kDa subunit family.
    
 
 0.962
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.