STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6WNH9_CIOINUncharacterized protein. (219 aa)    
Predicted Functional Partners:
F6Z0T1_CIOIN
Uncharacterized protein.
    
 0.987
F6Q0M2_CIOIN
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.974
LOC101242287
Serine/threonine-protein kinase 3.
   
 0.958
F6YC82_CIOIN
SARAH domain-containing protein.
    
 0.837
LOC100186064
Serine/threonine-protein phosphatase.
 
  
 
 0.798
F6WJM1_CIOIN
Uncharacterized protein.
    
 0.771
F6TJB5_CIOIN
DBR1 domain-containing protein.
 
      0.722
F6UJI9_CIOIN
Uncharacterized protein.
    
 0.701
H2XZZ6_CIOIN
Protein kinase domain-containing protein.
    
 
 0.677
F7BGY7_CIOIN
Uncharacterized protein.
   
 0.639
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.