STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6SNC6_CIOINAdoHcyase_NAD domain-containing protein; Belongs to the adenosylhomocysteinase family. (464 aa)    
Predicted Functional Partners:
F6Z9I2_CIOIN
CBS domain-containing protein.
  
 0.964
LOC100179361
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.946
LOC100182838
Betaine--homocysteine S-methyltransferase 1-like.
  
 
 0.945
F7BDU0_CIOIN
Hcy-binding domain-containing protein.
  
 
 0.945
F7AUB9_CIOIN
Hcy-binding domain-containing protein.
  
 
 0.945
F6XC87_CIOIN
Hcy-binding domain-containing protein.
  
 
 0.945
F6UMT8_CIOIN
Uncharacterized protein.
  
 0.926
H2XVN3_CIOIN
PALP domain-containing protein.
  
 0.922
LOC100184688
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
  
 
0.917
LOC100186481
Aminotran_1_2 domain-containing protein.
   
 
 0.913
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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