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ENSCING00000003426 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000003426" - L-lactate dehydrogenase in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000003426L-lactate dehydrogenase (341 aa)    
Predicted Functional Partners:
acl
ATP citrate-lyase (404 aa)
   
  0.984
pkm
Pyruvate kinase (534 aa)
   
  0.977
ENSCING00000008364
Aspartate aminotransferase (415 aa)
     
  0.965
ENSCING00000003669
Aspartate aminotransferase (425 aa)
     
  0.965
ENSCING00000010459
Uncharacterized protein ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (385 aa)
   
  0.946
ENSCING00000004269
Uncharacterized protein (363 aa)
   
  0.945
ENSCING00000003214
Uncharacterized protein (357 aa)
   
  0.945
ENSCING00000008058
Uncharacterized protein (440 aa)
   
  0.945
ENSCING00000023597
Uncharacterized protein (470 aa)
   
 
  0.934
pc
Pyruvate carboxylase ; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1186 aa)
   
  0.932
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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