STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7BH80_CIOINUncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (482 aa)    
Predicted Functional Partners:
LOC101243211
Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.999
F7BI62_CIOIN
NTP_transferase domain-containing protein.
   
 0.999
LOC100187159
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
0.999
F6YFY0_CIOIN
Tr-type G domain-containing protein.
   
 0.998
F6V6D5_CIOIN
NTP_transferase domain-containing protein.
   
 0.994
F6WWT1_CIOIN
eIF2B_5 domain-containing protein.
   
 0.975
F6V6F4_CIOIN
W2 domain-containing protein.
   
 0.947
LOC100183305
60S ribosomal protein L30.
   
 
  0.900
F6SLQ4_CIOIN
Uncharacterized protein.
   
 0.899
F7A983_CIOIN
Uncharacterized protein.
   
 0.734
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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