Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100180398TBC1 domain family member 14 isoform X2. (593 aa)    
Predicted Functional Partners:
F7A9X0_CIOIN
Protein kinase domain-containing protein.
    
 0.846
LOC100186853
Trafficking protein particle complex subunit 13.
    
 
 0.813
H2Y100_CIOIN
Uncharacterized protein.
    
 
 0.802
F6T120_CIOIN
TPR_REGION domain-containing protein.
    
 
 0.792
LOC100182304
Trafficking protein particle complex subunit 2-like protein.
    
 
 0.755
LOC100179545
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 
 0.750
LOC100180332
TBC1 domain family member 19.
      
 0.742
F6WPI9_CIOIN
FPL domain-containing protein.
      
 0.740
LOC100183093
Trafficking protein particle complex subunit 6B-like.
    
   0.737
LOC100184699
TBC1 domain family member 23-like.
      
 0.693
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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