STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6YR02_CIOINUncharacterized protein. (723 aa)    
Predicted Functional Partners:
F6THC9_CIOIN
Uncharacterized protein.
 
 0.986
LOC100181141
Uncharacterized protein.
 
 0.950
F7AHK9_CIOIN
CoA carboxyltransferase N-terminal domain-containing protein.
 
 0.841
LOC100186426
Negative elongation factor B.
   
 0.777
LOC100178841
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.677
H2XSN3_CIOIN
Pyruvate carboxyltransferase domain-containing protein.
 
  
 0.652
LOC100181405
Uncharacterized protein.
  
 0.647
H2Y1Y3_CIOIN
BPL_C domain-containing protein.
    
 0.631
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.627
F6T0F1_CIOIN
Uncharacterized protein.
   
0.618
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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