STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XGL3_CIOINNon-specific serine/threonine protein kinase. (669 aa)    
Predicted Functional Partners:
H2XWH9_CIOIN
Protein kinase domain-containing protein.
   
  
 0.945
LOC100185658
Kinetochore protein NDC80 homolog.
   
  
 0.936
LOC100176899
Protein kinase domain-containing protein.
  
  
0.928
LOC100179846
Lymphokine-activated killer T-cell-originated protein kinase isoform X1.
   
 0.925
F6X972_CIOIN
Uncharacterized protein.
   
 
 0.887
F6RC10_CIOIN
Uncharacterized protein.
   
 
 0.858
LOC100176733
Cnd3 domain-containing protein.
   
  
 0.857
H2XRK6_CIOIN
HORMA domain-containing protein.
   
 
 0.857
F7B1X4_CIOIN
WD_REPEATS_REGION domain-containing protein.
   
 
 0.851
LOC100186131
Nucleolar and spindle-associated protein 1-like isoform X1.
   
  
 0.850
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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