STRINGSTRING
zf(c3h)-16 protein (Ciona intestinalis) - STRING interaction network
"zf(c3h)-16" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(c3h)-16Uncharacterized protein; Zinc finger protein (218 aa)    
Predicted Functional Partners:
ENSCING00000003455
Uncharacterized protein (482 aa)
     
  0.998
ENSCING00000004198
Uncharacterized protein (166 aa)
     
  0.863
ENSCING00000008817
Uncharacterized protein (956 aa)
     
  0.838
ENSCING00000011663
Uncharacterized protein (149 aa)
     
  0.825
ENSCING00000008407
Uncharacterized protein (534 aa)
     
  0.822
ENSCING00000003319
Zinc finger protein (349 aa)
     
  0.821
ENSCING00000006015
Uncharacterized protein (461 aa)
     
  0.802
sf3b1
Uncharacterized protein (898 aa)
     
  0.802
ENSCING00000023523
Uncharacterized protein (482 aa)
     
  0.802
ENSCING00000023459
Uncharacterized protein (230 aa)
     
  0.797
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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