STRINGSTRING
nf-x-like protein (Ciona intestinalis) - STRING interaction network
"nf-x-like" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nf-x-likeTranscription factor protein (1123 aa)    
Predicted Functional Partners:
ENSCING00000007808
Uncharacterized protein (1773 aa)
     
   
  0.593
ENSCING00000019745
Peptidyl-prolyl cis-trans isomerase (220 aa)
       
      0.567
ENSCING00000018615
Peptidyl-prolyl cis-trans isomerase (113 aa)
       
      0.567
ENSCING00000002308
Uncharacterized protein (414 aa)
       
 
  0.563
ENSCING00000019817
Uncharacterized protein (200 aa)
     
   
  0.476
ENSCING00000019663
Uncharacterized protein (189 aa)
     
   
  0.476
ENSCING00000013341
Uncharacterized protein (78 aa)
     
   
  0.476
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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