STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6RF18_CIOINUncharacterized protein. (5108 aa)    
Predicted Functional Partners:
F6ZAQ4_CIOIN
Uncharacterized protein.
   
0.821
LOC100179911
Uncharacterized protein.
   
0.780
LOC100179685
Uncharacterized protein.
      
 0.642
F6ZHQ8_CIOIN
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.617
F6R7B5_CIOIN
C2 domain-containing protein.
      
 0.590
Kcnq4/5
Uncharacterized protein.
    
 
 0.585
LOC778910
ANK_REP_REGION domain-containing protein.
    
 0.561
F6UY41_CIOIN
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.550
F6Y8V9_CIOIN
Uncharacterized protein.
      
 0.531
F6ZH48_CIOIN
RING-type domain-containing protein.
      
 0.527
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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