STRINGSTRING
ENSCING00000004841 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000004841" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000004841Uncharacterized protein (678 aa)    
Predicted Functional Partners:
ENSCING00000003459
Autophagy-related protein 3 (311 aa)
     
  0.998
ENSCING00000012473
Uncharacterized protein (117 aa)
     
  0.998
ENSCING00000021347
Uncharacterized protein ; Ubiquitin-like protein involved in autophagic vesicle formation (98 aa)
     
  0.997
ENSCING00000018936
Uncharacterized protein (121 aa)
     
  0.987
ENSCING00000004513
Uncharacterized protein (128 aa)
     
  0.983
ENSCING00000004244
Uncharacterized protein (446 aa)
     
  0.891
ENSCING00000024130
Uncharacterized protein (583 aa)
   
 
  0.884
ENSCING00000023536
Uncharacterized protein (851 aa)
   
   
  0.878
ENSCING00000021762
Uncharacterized protein (826 aa)
   
   
  0.878
atg5
Autophagy protein 5 ; Involved in autophagic vesicle formation (268 aa)
     
  0.868
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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